I use VBScripts to open it hidden, like this:
Set objShell = WScript.CreateObject("WScript.Shell")
objShell.Run("%batchfile%"), 0, True
for e.g the bat file I want to run is run.bat
then I'll do like this
objShell.Run("run.bat"), 0, True
Instead of running the batch file run the vb file.
Write it in notepad and save it as *.vbs
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