Under the Run menu, there's a Skip All Breakpoints checkbox. If you select that, breakpoints won't fire (the actual breakpoint markers in the source have a line drawn through them to indicate they're in skip mode).
Of course, in the default configuration, running the code (rather than debugging it) also seems to ignore breakpoints so you may want to try running it instead of debugging. Note that this is default behaviour under Galileo/Ubuntu - whether that's different under other versions or operating systems is unknown to me.
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