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Java PlugInFilterRunner类代码示例

原作者: [db:作者] 来自: [db:来源] 收藏 邀请

本文整理汇总了Java中ij.plugin.filter.PlugInFilterRunner类的典型用法代码示例。如果您正苦于以下问题：Java PlugInFilterRunner类的具体用法？Java PlugInFilterRunner怎么用？Java PlugInFilterRunner使用的例子？那么恭喜您, 这里精选的类代码示例或许可以为您提供帮助。



PlugInFilterRunner类属于ij.plugin.filter包，在下文中一共展示了PlugInFilterRunner类的20个代码示例，这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞，您的评价将有助于我们的系统推荐出更棒的Java代码示例。

示例1: showDialog

import ij.plugin.filter.PlugInFilterRunner; //导入依赖的package包/类
@Override
public int showDialog(final ImagePlus imp, final String command, final PlugInFilterRunner pfr) {
    loadFromIJPref();

    final GenericDialog dialog = new GenericDialog(TITLE);
    dialog.addNumericField("Filter size (n x n)", filterSize, 0, 3, "pixels");
    dialog.addPreviewCheckbox(pfr);
    dialog.addDialogListener(this);

    dialog.showDialog();

    if (dialog.wasCanceled()) {
        return DONE;
    }

    saveToIJPref();
    return IJ.setupDialog(imp, FLAGS);
}
开发者ID:ij-plugins，项目名称:ijp-toolkit，代码行数:19，代码来源:FastMedianPlugin.java


示例2: showDialog

import ij.plugin.filter.PlugInFilterRunner; //导入依赖的package包/类
public int showDialog(ImagePlus imp, String command, PlugInFilterRunner pfr) {
	GenericDialog gd = new GenericDialog("Recursive filtering");
		gd.addChoice("filter", filter, "Median");
		gd.addNumericField("radius", 1, 0, 10, "max.: 3");
           gd.addNumericField("max_iterations", 200, 0, 10, "max.: 500");
           			
		gd.addPreviewCheckbox(pfr);	// passing pfr makes the filter ready for preview
           gd.addDialogListener(this);	// the DialogItemChanged method will be called on user input
           gd.showDialog();		// display the dialog; preview runs in the background now
           if (gd.wasCanceled()) {
           	imp.setTitle(originalImageTitle);
           	return DONE;
           }
          	IJ.register(this.getClass());	// protect static class variables (filter parameters) from garbage collection
		//radius = (int) gd.getNextNumber();
        this.pfr = pfr;
        return IJ.setupDialog(imp, flags);
}
开发者ID:biovoxxel，项目名称:BioVoxxel_Toolbox，代码行数:19，代码来源:Basic_Recursive_Filters.java


示例3: showDialog

import ij.plugin.filter.PlugInFilterRunner; //导入依赖的package包/类
public int showDialog(ImagePlus imp, String command, PlugInFilterRunner pfr) {
	
	if(!imp.getProcessor().isBinary()) {
		IJ.error("works only on 8-bit binary images");
		return DONE;
	}
	
	GenericDialog gd = new GenericDialog("Watershed Irregular Features");
	gd.addNumericField("erosion cycle number:", 1, 0, 5, "");
	gd.addNumericField("convexity_threshold", 0, 2, 5, "");
	gd.addStringField("separator_size", "0-Infinity");
	gd.addCheckbox("exclude", false);
	gd.addPreviewCheckbox(pfr, label); // passing pfr makes the filter ready for preview
	gd.addDialogListener(this); // the DialogItemChanged method will be called on user input
	gd.addHelp("http://fiji.sc/BioVoxxel_Toolbox#Watershed_Irregular_Features");
	gd.showDialog(); // display the dialog; preview runs in the background now
	if (gd.wasCanceled()) {
		return DONE;
	}
	IJ.register(this.getClass()); // protect static class variables (filter parameters) from garbage collection
	this.pfr = pfr;
	return IJ.setupDialog(imp, flags); // ask whether to process all slices of stack (if a stack)
}
开发者ID:biovoxxel，项目名称:BioVoxxel_Toolbox，代码行数:24，代码来源:Watershed_Irregular_Features.java


示例4: showDialog

import ij.plugin.filter.PlugInFilterRunner; //导入依赖的package包/类
@Override
public int showDialog(ImagePlus imp, String arg, PlugInFilterRunner pfr) {
	
	GenericDialog dialog = new GenericDialog("Peak Finder");
	
	dialog.addCheckbox("Use_Discoidal_Averaging_Filter", useDiscoidalAveraging);
	dialog.addNumericField("Inner_radius", innerRadius, 0);
	dialog.addNumericField("Outer_radius", outerRadius, 0);
	
	dialog.addNumericField("Threshold (mean + n times standard deviation)", threshold, 2);
	dialog.addNumericField("Threshold_value (0 = ignore)", thresholdValue, 2);
	dialog.addNumericField("Selection_radius (in pixels)", selectionRadius, 0);
	dialog.addNumericField("Minimum_distance between peaks (in pixels)", minimumDistance, 0);
	
	dialog.addDialogListener(this);
	dialog.addPreviewCheckbox(pfr);
	
	dialog.showDialog();
	
	if (dialog.wasCanceled())
		return DONE;
	
	isPreview = false;

	return IJ.setupDialog(imp, flags);
}
开发者ID:SingleMolecule，项目名称:smb-plugins，代码行数:27，代码来源:PeakFinder.java


示例5: showDialog

import ij.plugin.filter.PlugInFilterRunner; //导入依赖的package包/类
public int showDialog(ImagePlus imp, String command, PlugInFilterRunner pfr)
{
	// Note: We cannot use a NonBlockinnericDialog as scrolling through the image
	// throws away the snap shot. The pixel data for the previous slice is then fixed
	// with the preview. So we can only support a single slice.
	
	GenericDialog gd = new GenericDialog(TITLE);
	gd.addHelp(About.HELP_URL);

	gd.addMessage("Smooth image:");
	gd.addChoice("Spot_filter", filterNames, filterNames[filter1]);
	gd.addSlider("Smoothing", 0, 4.5, smooth1);
	gd.addCheckbox("Difference_filter", differenceFilter);
	gd.addChoice("Spot_filter2", filterNames, filterNames[filter2]);
	gd.addSlider("Smoothing2", 1.5, 6, smooth2);

	gd.addPreviewCheckbox(pfr);
	gd.addDialogListener(this);
	gd.showDialog();

	if (gd.wasCanceled() || !dialogItemChanged(gd, null))
		return DONE;

	return IJ.setupDialog(imp, flags);
}
开发者ID:aherbert，项目名称:GDSC-SMLM，代码行数:26，代码来源:SmoothImage.java


示例6: showDialog

import ij.plugin.filter.PlugInFilterRunner; //导入依赖的package包/类
@Override
public int showDialog(ImagePlus imp, String command, PlugInFilterRunner pfr)
{
	// Create the configuration dialog
	GenericDialog gd = new GenericDialog("Area Opening");

	gd.addNumericField("Pixel Number", 100, 0, 10, "pixels");
	
	gd.addPreviewCheckbox(pfr);
	gd.addDialogListener(this);
       previewing = true;
       gd.showDialog();
       previewing = false;
       
       if (gd.wasCanceled())
       	return DONE;
		
   	parseDialogParameters(gd);
		
	// clean up an return 
	gd.dispose();
	return flags;
}
开发者ID:ijpb，项目名称:MorphoLibJ，代码行数:24，代码来源:GrayscaleAreaOpeningPlugin.java


示例7: showDialog

import ij.plugin.filter.PlugInFilterRunner; //导入依赖的package包/类
@Override
public int showDialog(ImagePlus imp, String command, PlugInFilterRunner pfr)
{
	// Create the configuration dialog
	GenericDialog gd = new GenericDialog("Box Diagonal Opening");

	gd.addNumericField("Diagonal Min.", 100, 0, 10, "pixels");
	
	gd.addPreviewCheckbox(pfr);
	gd.addDialogListener(this);
       previewing = true;
       gd.showDialog();
       previewing = false;
       
       if (gd.wasCanceled())
       	return DONE;
		
   	parseDialogParameters(gd);
		
	// clean up an return 
	gd.dispose();
	return flags;
}
开发者ID:ijpb，项目名称:MorphoLibJ，代码行数:24，代码来源:GrayscaleBoxDiameterOpeningPlugin.java


示例8: showDialog

import ij.plugin.filter.PlugInFilterRunner; //导入依赖的package包/类
public int showDialog(ImagePlus imp, String command, PlugInFilterRunner pfr)
{
	GenericDialog gd = new GenericDialog(TITLE);

	// Set-up the HSB images
	ColorProcessor cp = (ColorProcessor) imp.getProcessor().duplicate();
	getHSB((int[]) cp.getPixels());

	gd.addSlider("Hue", 0.01, 1, hue);
	gd.addSlider("Hue_width", 0.01, 1, hueWidth);
	gd.addSlider("Saturation", 0.01, 1, saturation);
	gd.addSlider("Saturation_width", 0.01, 1, saturationWidth);
	gd.addSlider("Brightness", 0.01, 1, brightness);
	gd.addSlider("Brightness_width", 0.01, 1, brightnessWidth);

	gd.addHelp(gdsc.help.URL.UTILITY);

	gd.addPreviewCheckbox(pfr);
	gd.addDialogListener(this);
	gd.showDialog();

	if (gd.wasCanceled() || !dialogItemChanged(gd, null))
		return DONE;

	return flags;
}
开发者ID:aherbert，项目名称:GDSC，代码行数:27，代码来源:HSB_Filter.java


示例9: showDialog

import ij.plugin.filter.PlugInFilterRunner; //导入依赖的package包/类
public int showDialog(ImagePlus imp, String command, PlugInFilterRunner pfr)
{
	GenericDialog gd = new GenericDialog(TITLE);
	gd.addHelp(URL.UTILITY);

	gd.addMessage("Find the closest pairs of marked ROI points");

	gd.addSlider("Radius", 5, 50, radius);
	gd.addCheckbox("Add_overlay", addOverlay);
	gd.addCheckbox("Kill_ROI", killRoi);

	gd.addPreviewCheckbox(pfr);
	gd.addDialogListener(this);
	gd.showDialog();
	if (gd.wasCanceled() || !dialogItemChanged(gd, null))
	{
		// Remove any overlay we added
		if (addedOverlay)
			imp.setOverlay(null);
		return DONE;
	}

	return DOES_ALL | FINAL_PROCESSING;
}
开发者ID:aherbert，项目名称:GDSC，代码行数:25，代码来源:SpotPairs.java


示例10: showDialog

import ij.plugin.filter.PlugInFilterRunner; //导入依赖的package包/类
@Override
public int showDialog(final ImagePlus imp, final String command,
	final PlugInFilterRunner pfr)
{
	initialImp = imp;
	calibration = imp.getCalibration();
	/*
	 * command is an empty String if the plugin is called from within the main method of this class (testing). In
	 * this case we add the name of this class as title.
	 */
	final String title = (command != "" ? command : "Test " + EFTEMj
		.getNameWithoutPackage(this));
	if (showParameterDialog(title) == CANCEL) {
		canceled();
		return NO_CHANGES | DONE;
	}
	if (createNew == true) {
		return FLAGS | NO_CHANGES;
	}
	return FLAGS;
}
开发者ID:EFTEMj，项目名称:EFTEMj，代码行数:22，代码来源:StackShifterPlugin.java


示例11: showDialog

import ij.plugin.filter.PlugInFilterRunner; //导入依赖的package包/类
@Override
public int showDialog(final ImagePlus imp, final String command,
	final PlugInFilterRunner pfr)
{
	if (imp.getStackSize() != 2 & imp.getStackSize() != 3) {
		IJ.error("Wrong Image", "The stack has not a size of 2 or 3.\n" +
			"Image 1: The detected borders.\n" +
			"(Image 2: The unprocessed borders.)\n" +
			"Image 2(3): The original SR-EELS data.");
		return DONE;
	}
	input = imp;
	calibration = imp.getCalibration();
	if (showParameterDialog(command) == OK) {
		if (rotate) {
			final ImagePlus temp = input;
			input = new Duplicator().run(input, 1, input.getStackSize(), 1, 1, 1,
				1);
			temp.unlock();
			IJ.run(input, "Rotate 90 Degrees Right", "");
		}
		return FLAGS;
	}
	return DONE;
}
开发者ID:EFTEMj，项目名称:EFTEMj，代码行数:26，代码来源:SR_EELS_CorrectionOnlyPlugin.java


示例12: showDialog

import ij.plugin.filter.PlugInFilterRunner; //导入依赖的package包/类
/** Displays the dialog prompt. */
@Override
public int showDialog(final ImagePlus imp, final String command, final PlugInFilterRunner pfr) {
	this.pfr = pfr;

	final String msg = "<html><div WIDTH=350>"
			+ "<a href='https://github.com/tferr/Scripts/blob/master/Segmentation/README.md#shen-castan-edge-detector'>"
			+ "Shen-Castan</a> filtering is an edge detection technique. It is an alternative "
			+ "to other popular approaches such as "
			+ "<a href='http://en.wikipedia.org/wiki/Canny_edge_detector'>Canny</a>-"
			+ "<a href='http://en.wikipedia.org/wiki/Deriche_edge_detector'>Deriche</a> filtering.</p>"
			+ "<p>The Shen-Castan coefficient corresponds to a smooting factor <i>alpha</i>. "
			+ "<i>Alpha</i> can vary between 0 (high smoothing, suitable for noisy images) "
			+ "and 1 (no smoothing, suitable for non-noisy images).</p></div></html>";

	final GenericDialog gd = new GenericDialog(command);
	gd.addSlider("Coefficient:", 0.0001d, 1.0001d, f);
	gd.addPreviewCheckbox(pfr);
	gd.addDialogListener(this);
	gd.addHelp(msg);
	gd.showDialog();
	if (gd.wasCanceled() || !dialogItemChanged(gd, null)) // read parameters
		return DONE;
	return IJ.setupDialog(imp, flags);
}
开发者ID:tferr，项目名称:Scripts，代码行数:26，代码来源:ShenCastan.java


示例13: showDialog

import ij.plugin.filter.PlugInFilterRunner; //导入依赖的package包/类
public int showDialog (ImagePlus imp, String command, PlugInFilterRunner pfr) {
    gd = new GenericDialog("Naive Background Correction");
    gd.addNumericField("Radius:", 3.00, 2);
    gd.addSlider("Iteration",1,30,15);
    gd.addCheckbox("Subtract background",true);
    gd.addCheckbox("Divide background",false);
    gd.addPreviewCheckbox(pfr);
    gd.addDialogListener(this);
    gd.showDialog();
    if (gd.wasCanceled()) return DONE;
    IJ.register(this.getClass()); // protect static class variables (parameters) from garbage collection
    return IJ.setupDialog(imp, FLAGS);
}
开发者ID:keithoffer，项目名称:ImageJ-Naive-Background-Correction，代码行数:14，代码来源:Naive_Background_Correction.java


示例14: showDialog

import ij.plugin.filter.PlugInFilterRunner; //导入依赖的package包/类
public int showDialog (ImagePlus imp, String command, PlugInFilterRunner pfr) {
	if (doOptions) {
		this.imp = imp;
		this.pfr = pfr;
		GenericDialog gd = new GenericDialog("Binary Options");
		gd.addNumericField("Iterations (1-"+MAX_ITERATIONS+"):", iterations, 0, 3, "");
		gd.addNumericField("Count (1-8):", count, 0, 3, "");
		gd.addCheckbox("Black background", Prefs.blackBackground);
		gd.addCheckbox("Pad edges when eroding", Prefs.padEdges);
		gd.addChoice("EDM output:", outputTypes, outputTypes[EDM.getOutputType()]);
		if (imp != null) {
			gd.addChoice("Do:", operations, operation);
			gd.addPreviewCheckbox(pfr);
			gd.addDialogListener(this);
			previewing = true;
		}
		gd.addHelp(IJ.URL+"/docs/menus/process.html#options");
		gd.showDialog();
		previewing = false;
		if (gd.wasCanceled()) return DONE;
		if (imp==null) {                 //options dialog only, no do/preview
			dialogItemChanged(gd, null); //read dialog result
			return DONE;
		}
		return operation.equals(NO_OPERATION) ? DONE : IJ.setupDialog(imp, flags);
	} else {   //no dialog, 'arg' is operation type
		if (!imp.getProcessor().isBinary()) {
			IJ.error("8-bit binary (black and white only) image required.");
			return DONE;
		}
		return IJ.setupDialog(imp, flags);
	}
}
开发者ID:mstritt，项目名称:orbit-image-analysis，代码行数:34，代码来源:BinaryOrbit.java


示例15: showDialog

import ij.plugin.filter.PlugInFilterRunner; //导入依赖的package包/类
public int showDialog(ImagePlus imp, String command, PlugInFilterRunner pfr) {
	gd = new GenericDialog("Convolver...", IJ.getInstance());
	gd.addTextAreas(kernelText, null, 10, 30);
	gd.addPanel(makeButtonPanel(gd));
	gd.addCheckbox("Normalize Kernel", normalizeFlag);
	gd.addPreviewCheckbox(pfr);
	gd.addDialogListener(this);
	gd.showDialog();
	if (gd.wasCanceled()) return DONE;
	this.pfr = pfr;
	return IJ.setupDialog(imp, flags);
}
开发者ID:biocompibens，项目名称:SME，代码行数:13，代码来源:SME_ENS_Convolver.java


示例16: showDialog

import ij.plugin.filter.PlugInFilterRunner; //导入依赖的package包/类
/** Called by the PlugInFilterRunner after setup.
 *  Asks the user in case of a stack and prepares a separate ouptut stack if required
 */

public int showDialog (ImagePlus imp, String command, PlugInFilterRunner pfr) {
    this.pfr = pfr;
    int width = imp.getWidth();
    int height= imp.getHeight();
    //ask whether to process all slices of stack & prepare stack
    //(if required) for writing into it in parallel threads
    flags = IJ.setupDialog(imp, flags);
    if ((flags&DOES_STACKS)!=0 && outImageType!=BYTE_OVERWRITE) {
        outStack = new ImageStack(width, height, imp.getStackSize());
        maxFinder.setNPasses(imp.getStackSize());
    }
    return flags;
}
开发者ID:zitmen，项目名称:thunderstorm，代码行数:18，代码来源:ImageJ_EDM.java


示例17: showDialog

import ij.plugin.filter.PlugInFilterRunner; //导入依赖的package包/类
@Override
public int showDialog(ImagePlus imp, String arg, PlugInFilterRunner pfr) {
	
	GenericDialog dialog = new GenericDialog("Peak Fitter");
	
	dialog.addCheckbox("Use_Discoidal_Averaging_Filter", useDiscoidalAveraging);
	dialog.addNumericField("Inner_radius", innerRadius, 0);
	dialog.addNumericField("Outer_radius", outerRadius, 0);
	
	dialog.addNumericField("Threshold (mean + n times standard deviation)", threshold, 2);
	dialog.addNumericField("Threshold_value (0 = ignore)", thresholdValue, 2);
	dialog.addNumericField("Minimum_distance between peaks (in pixels)", minimumDistance, 0);
	
	dialog.addNumericField("Fit_radius", fitRadius, 0);
	
	dialog.addNumericField("Max_error_baseline", maxError[0], 2);
	dialog.addNumericField("Max_error_height", maxError[1], 2);
	dialog.addNumericField("Max_error_x", maxError[2], 2);
	dialog.addNumericField("Max_error_y", maxError[3], 2);
	dialog.addNumericField("Max_error_sigma_x", maxError[4], 2);
	dialog.addNumericField("Max_error_sigma_y", maxError[5], 2);
	
	dialog.addCheckbox("Fit_peaks_inside_rois", isRoiFit);
	
	dialog.addDialogListener(this);
	dialog.addPreviewCheckbox(pfr);
	dialog.showDialog();
	
	if (dialog.wasCanceled())
		return DONE;
	
	isPreview = false;
	
	return IJ.setupDialog(imp, flags);
}
开发者ID:SingleMolecule，项目名称:smb-plugins，代码行数:36，代码来源:PeakFitter.java


示例18: showDialog

import ij.plugin.filter.PlugInFilterRunner; //导入依赖的package包/类
@Override
public int showDialog(ImagePlus imp, String arg, PlugInFilterRunner pfr) {
	
	GenericDialog dialog = new GenericDialog("Discoidal Averaging Filter");
	dialog.addNumericField("inner_radius", innerRadius, 0);
	dialog.addNumericField("outer_radius", outerRadius, 0);
	dialog.addPreviewCheckbox(pfr);
	dialog.addDialogListener(this);
	dialog.showDialog();
	
	if (dialog.wasCanceled())
		return DONE;
	
	return IJ.setupDialog(imp, flags);
}
开发者ID:SingleMolecule，项目名称:smb-plugins，代码行数:16，代码来源:DiscoidalAveragingFilter.java


示例19: showDialog

import ij.plugin.filter.PlugInFilterRunner; //导入依赖的package包/类
public int showDialog(ImagePlus imp, String command, PlugInFilterRunner pfr)
{
	this.pfr = pfr;
	preview = true;

	GenericDialog gd = new GenericDialog(TITLE);
	gd.addHelp(About.HELP_URL);

	gd.addMessage("Replace pixels with mean if they are N StdDevs from the mean");

	gd.addSlider("Radius", 1, 5, radius);
	gd.addSlider("Error (SD units)", 2.5, 7, error);

	gd.addPreviewCheckbox(pfr);
	gd.addDialogListener(this);

	gd.addMessage("");
	label = (Label) gd.getMessage();

	gd.showDialog();

	if (gd.wasCanceled() || !dialogItemChanged(gd, null))
		return DONE;

	preview = false;
	cachedS = cachedSS = null;
	label = null;
	return IJ.setupDialog(imp, FLAGS);
}
开发者ID:aherbert，项目名称:GDSC-SMLM，代码行数:30，代码来源:PixelFilter.java


示例20: showDialog

import ij.plugin.filter.PlugInFilterRunner; //导入依赖的package包/类
public int showDialog(ImagePlus imp, String command, PlugInFilterRunner pfr)
{
	// Get available kernels
	String[] names = Utils.getImageList(Utils.GREY_SCALE | Utils.SINGLE);
	if (names.length == 0)
	{
		IJ.error(TITLE, "No suitable kernel images");
		return DONE;
	}
	
	this.dataImp=imp;

	ExtendedGenericDialog gd = new ExtendedGenericDialog(TITLE);
	gd.addHelp(About.HELP_URL);

	gd.addMessage("Convolve an image using another image as the convolution kernel");

	gd.addChoice("Kernel_image", names, title);
	gd.addChoice("Method", METHODS, method);
	gd.addChoice("Filter", FILTERS, filter);
	gd.addSlider("Border", 0, 10, border);
	gd.addCheckbox("Zero_outside_image", zero);

	gd.addDialogListener(this);
	gd.addPreviewCheckbox(pfr);

	gd.showDialog();

	if (gd.wasCanceled() || !dialogItemChanged(gd, null))
		return DONE;

	return IJ.setupDialog(imp, FLAGS);
}
开发者ID:aherbert，项目名称:GDSC-SMLM，代码行数:34，代码来源:ImageKernelFilter.java



注：本文中的ij.plugin.filter.PlugInFilterRunner类示例整理自Github/MSDocs等源码及文档管理平台，相关代码片段筛选自各路编程大神贡献的开源项目，源码版权归原作者所有，传播和使用请参考对应项目的License；未经允许，请勿转载。

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