本文整理汇总了Python中mystic.math.measures.spread函数的典型用法代码示例。如果您正苦于以下问题:Python spread函数的具体用法?Python spread怎么用?Python spread使用的例子?那么恭喜您, 这里精选的函数代码示例或许可以为您提供帮助。
在下文中一共展示了spread函数的11个代码示例,这些例子默认根据受欢迎程度排序。您可以为喜欢或者感觉有用的代码点赞,您的评价将有助于我们的系统推荐出更棒的Python代码示例。
示例1: bounded_mean
def bounded_mean(mean_x, samples, xmin, xmax, wts=None):
from mystic.math.measures import impose_mean, impose_spread
from mystic.math.measures import spread, mean
from numpy import asarray
a = impose_mean(mean_x, samples, wts)
if min(a) < xmin: # maintain the bound
#print "violate lo(a)"
s = spread(a) - 2*(xmin - min(a)) #XXX: needs compensation (as below) ?
a = impose_mean(mean_x, impose_spread(s, samples, wts), wts)
if max(a) > xmax: # maintain the bound
#print "violate hi(a)"
s = spread(a) + 2*(xmax - max(a)) #XXX: needs compensation (as below) ?
a = impose_mean(mean_x, impose_spread(s, samples, wts), wts)
return asarray(a)
开发者ID:agamdua,项目名称:mystic,代码行数:14,代码来源:discrete.py
示例2: test_penalize
def test_penalize():
from mystic.math.measures import mean, spread
def mean_constraint(x, target):
return mean(x) - target
def range_constraint(x, target):
return spread(x) - target
@quadratic_equality(condition=range_constraint, kwds={'target':5.0})
@quadratic_equality(condition=mean_constraint, kwds={'target':5.0})
def penalty(x):
return 0.0
def cost(x):
return abs(sum(x) - 5.0)
from mystic.solvers import fmin
from numpy import array
x = array([1,2,3,4,5])
y = fmin(cost, x, penalty=penalty, disp=False)
assert round(mean(y)) == 5.0
assert round(spread(y)) == 5.0
assert round(cost(y)) == 4*(5.0)
开发者ID:uqfoundation,项目名称:mystic,代码行数:25,代码来源:test_constraints.py
示例3: test_constrain
def test_constrain():
from mystic.math.measures import mean, spread
from mystic.math.measures import impose_mean, impose_spread
def mean_constraint(x, mean=0.0):
return impose_mean(mean, x)
def range_constraint(x, spread=1.0):
return impose_spread(spread, x)
@inner(inner=range_constraint, kwds={'spread':5.0})
@inner(inner=mean_constraint, kwds={'mean':5.0})
def constraints(x):
return x
def cost(x):
return abs(sum(x) - 5.0)
from mystic.solvers import fmin_powell
from numpy import array
x = array([1,2,3,4,5])
y = fmin_powell(cost, x, constraints=constraints, disp=False)
assert mean(y) == 5.0
assert spread(y) == 5.0
assert almostEqual(cost(y), 4*(5.0))
开发者ID:uqfoundation,项目名称:mystic,代码行数:26,代码来源:test_coupler.py
示例4: test_generate_constraint
def test_generate_constraint():
constraints = """
spread([x0, x1, x2]) = 10.0
mean([x0, x1, x2]) = 5.0"""
from mystic.math.measures import mean, spread
solv = generate_solvers(constraints)
assert almostEqual(mean(solv[0]([1,2,3])), 5.0)
assert almostEqual(spread(solv[1]([1,2,3])), 10.0)
constraint = generate_constraint(solv)
assert almostEqual(constraint([1,2,3]), [0.0,5.0,10.0], 1e-10)
开发者ID:uqfoundation,项目名称:mystic,代码行数:13,代码来源:test_symbolic.py
示例5: test_solve_constraint
def test_solve_constraint():
constraints = """
spread([x0,x1]) - 1.0 = mean([x0,x1])
mean([x0,x1,x2]) = x2"""
from mystic.math.measures import mean, spread
_constraints = solve(constraints)
solv = generate_solvers(_constraints)
constraint = generate_constraint(solv)
x = constraint([1.0, 2.0, 3.0])
assert all(x) == all([1.0, 5.0, 3.0])
assert mean(x) == x[2]
assert spread(x[:-1]) - 1.0 == mean(x[:-1])
开发者ID:cdeil,项目名称:mystic,代码行数:14,代码来源:test_symbolic.py
示例6: test_as_constraint
def test_as_constraint():
from mystic.math.measures import mean, spread
def mean_constraint(x, target):
return mean(x) - target
def range_constraint(x, target):
return spread(x) - target
@quadratic_equality(condition=range_constraint, kwds={'target':5.0})
@quadratic_equality(condition=mean_constraint, kwds={'target':5.0})
def penalty(x):
return 0.0
ndim = 3
constraints = as_constraint(penalty, solver='fmin')
#XXX: this is expensive to evaluate, as there are nested optimizations
from numpy import arange
x = arange(ndim)
_x = constraints(x)
assert round(mean(_x)) == 5.0
assert round(spread(_x)) == 5.0
assert round(penalty(_x)) == 0.0
def cost(x):
return abs(sum(x) - 5.0)
npop = ndim*3
from mystic.solvers import diffev
y = diffev(cost, x, npop, constraints=constraints, disp=False, gtol=10)
assert round(mean(y)) == 5.0
assert round(spread(y)) == 5.0
assert round(cost(y)) == 5.0*(ndim-1)
开发者ID:uqfoundation,项目名称:mystic,代码行数:36,代码来源:test_constraints.py
示例7: test_with_mean_spread
def test_with_mean_spread():
from mystic.math.measures import mean, spread, impose_mean, impose_spread
@with_spread(50.0)
@with_mean(5.0)
def constrained_squared(x):
return [i**2 for i in x]
from numpy import array
x = array([1,2,3,4,5])
y = impose_spread(50.0, impose_mean(5.0,[i**2 for i in x]))
assert almostEqual(mean(y), 5.0, tol=1e-15)
assert almostEqual(spread(y), 50.0, tol=1e-15)
assert constrained_squared(x) == y
开发者ID:uqfoundation,项目名称:mystic,代码行数:15,代码来源:test_constraints.py
示例8: test_as_penalty
def test_as_penalty():
from mystic.math.measures import mean, spread
@with_spread(5.0)
@with_mean(5.0)
def constraint(x):
return x
penalty = as_penalty(constraint)
from numpy import array
x = array([1,2,3,4,5])
def cost(x):
return abs(sum(x) - 5.0)
from mystic.solvers import fmin
y = fmin(cost, x, penalty=penalty, disp=False)
assert round(mean(y)) == 5.0
assert round(spread(y)) == 5.0
assert round(cost(y)) == 4*(5.0)
开发者ID:uqfoundation,项目名称:mystic,代码行数:22,代码来源:test_constraints.py
示例9: graphical_distance
def graphical_distance(model, points, **kwds):
"""find the radius(x') that minimizes the graph between reality, y = G(x),
and an approximating function, y' = F(x')
Inputs:
model = the model function, y' = F(x'), that approximates reality, y = G(x)
points = object of type 'datapoint' to validate against; defines y = G(x)
Additional Inputs:
ytol = maximum acceptable difference |y - F(x')|; a single value
xtol = maximum acceptable difference |x - x'|; an iterable or single value
cutoff = zero out distances less than cutoff; typically: ytol, 0.0, or None
hausdorff = norm; where if given, ytol = |y - F(x')| + |x - x'|/norm
Returns:
radius = minimum distance from x,G(x) to x',F(x') for each x
Notes:
xtol defines the n-dimensional base of a pilar of height ytol, centered at
each point. The region inside the pilar defines the space where a "valid"
model must intersect. If xtol is not specified, then the base of the pilar
will be a dirac at x' = x. This function performs an optimization for each
x to find an appropriate x'. While cutoff and ytol are very tightly related,
they play a distinct role; ytol is used to set the optimization termination
for an acceptable |y - F(x')|, while cutoff is applied post-optimization.
If we are using the hausdorff norm, then ytol will set the optimization
termination for an acceptable |y - F(x')| + |x - x'|/norm, where the x
values are normalized by norm = hausdorff.
""" #FIXME: update docs to show normalization in y
#NotImplemented:
#L = list of lipschitz constants, for use when lipschitz metric is desired
#constraints = constraints function for finding minimum distance
from mystic.math.legacydata import dataset
from numpy import asarray, sum, isfinite, zeros, seterr
from mystic.solvers import diffev2, fmin_powell
from mystic.monitors import Monitor, VerboseMonitor
# ensure target xe and ye is a dataset
target = dataset()
target.load(*_get_xy(points))
nyi = target.npts # y's are target.values
nxi = len(target.coords[-1]) # nxi = len(x) / len(y)
# NOTE: the constraints function is a function over a single xe,ye
# because each underlying optimization is over a single xe,ye.
# thus, we 'pass' on using constraints at this time...
constraints = None # default is no constraints
if 'constraints' in kwds: constraints = kwds.pop('constraints')
if not constraints: # if None (default), there are no constraints
constraints = lambda x: x
# get tolerance in y and wiggle room in x
ytol = kwds.pop('ytol', 0.0)
xtol = kwds.pop('xtol', 0.0) # default is to not allow 'wiggle room' in x
cutoff = ytol # default is to zero out distances less than tolerance
if 'cutoff' in kwds: cutoff = kwds.pop('cutoff')
if cutoff is True: cutoff = ytol
elif cutoff is False: cutoff = None
ipop = kwds.pop('ipop', min(20, 3*nxi)) #XXX: tune ipop?
imax = kwds.pop('imax', 1000) #XXX: tune imax?
# get range for the dataset (normalization for hausdorff distance)
hausdorff = kwds.pop('hausdorff', False)
if not hausdorff: # False, (), None, ...
ptp = [0.0]*nxi
yptp = 1.0
elif hausdorff is True:
from mystic.math.measures import spread
ptp = [spread(xi) for xi in zip(*target.coords)]
yptp = spread(target.values) #XXX: this can lead to bad bad things...
else:
try: #iterables
if len(hausdorff) < nxi+1:
hausdorff = list(hausdorff) + [0.0]*(nxi - len(hausdorff)) + [1.0]
ptp = hausdorff[:-1] # all the x
yptp = hausdorff[-1] # just the y
except TypeError: #non-iterables
ptp = [hausdorff]*nxi
yptp = hausdorff
#########################################################################
def radius(model, point, ytol=0.0, xtol=0.0, ipop=None, imax=None):
"""graphical distance between a single point x,y and a model F(x')"""
# given a single point x,y: find the radius = |y - F(x')| + delta
# radius is just a minimization over x' of |y - F(x')| + delta
# where we apply a constraints function (of box constraints) of
# |x - x'| <= xtol (for each i in x)
#
# if hausdorff = some iterable, delta = |x - x'|/hausdorff
# if hausdorff = True, delta = |x - x'|/spread(x); using the dataset range
# if hausdorff = False, delta = 0.0
#
# if ipop, then DE else Powell; ytol is used in VTR(ytol)
# and will terminate when cost <= ytol
x,y = _get_xy(point)
y = asarray(y)
# catch cases where yptp or y will cause issues in normalization
#if not isfinite(yptp): return 0.0 #FIXME: correct? shouldn't happen
#if yptp == 0: from numpy import inf; return inf #FIXME: this is bad
#.........这里部分代码省略.........
开发者ID:Magellen,项目名称:mystic,代码行数:101,代码来源:distance.py
示例10: range_constraint
def range_constraint(x, target):
return spread(x) - target
开发者ID:uqfoundation,项目名称:mystic,代码行数:2,代码来源:test_constraints.py
示例11: __range
def __range(self):
from mystic.math.measures import spread
return spread(self.positions)
开发者ID:agamdua,项目名称:mystic,代码行数:3,代码来源:discrete.py
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