MATLAB Toolboxes
top Audio - Astronomy - BioMedicalInformatics - Chemometrics - Chaos - Chemistry - Coding - Control - Communications - Engineering - Excel - FEM - Finance - GAs - Graphics - Images - ICA - Kernel - Markov - Medical - MIDI - Misc. - MPI - NNets - Oceanography - Optimization - Plot - Signal Processing - Optimization - Statistics - SVM - etc ...
New
ZSM (zero sum multinomial)
http://mcgillb.user.msu.edu/zsmcode.html
Binaural-modeling software for MATLAB/Windows
http://www.lifesci.sussex.ac.uk/home/Michael_Akeroyd/download2.html
Statistical Parametric Mapping (SPM)
http://www.fil.ion.ucl.ac.uk/spm/ext/
BOOTSTRAP MATLAB TOOLBOX
http://www.csp.curtin.edu.au/downloads/bootstrap_toolbox.html
The DSS package for MATLAB
DSS Matlab package contains algorithms for performing linear, deflation and symmetric DSS.
http://www.cis.hut.fi/projects/dss/package/
Psychtoolbox
http://www.psychtoolbox.org/download.html
Multisurface Method Tree with MATLAB
http://www.cs.wisc.edu/~olvi/uwmp/msmt.html
A Matlab Toolbox for every single topic !
http://stommel.tamu.edu/~baum/toolboxes.html
eg. BrainStorm - MEG and EEG data visualization and processing
CLAWPACK is a software package designed to compute numerical solutions to hyperbolic partial differential equations using a wave propagation approach
http://www.amath.washington.edu/~claw/
DIPimage - Image Processing Toolbox
PRTools - Pattern Recognition Toolbox (+ Neural Networks)
NetLab - Neural Network Toolbox
FSTB - Fuzzy Systems Toolbox
Fusetool - Image Fusion Toolbox
http://www.metapix.de/toolbox.htm
WAVEKIT - Wavelet Toolbox
Gat - Genetic Algorithm Toolbox
TSTOOL is a MATLAB software package for nonlinear time series analysis.
TSTOOL can be used for computing: Time-delay reconstruction, Lyapunov exponents, Fractal dimensions, Mutual information, Surrogate data tests, Nearest neighbor statistics, Return times, Poincare sections, Nonlinear prediction
http://www.physik3.gwdg.de/tstool/
MATLAB / Data description toolbox
A Matlab toolbox for data description, outlier and novelty detection
March 26, 2004 - D.M.J. Tax
http://www-ict.ewi.tudelft.nl/~davidt/dd_tools/dd_manual.html
MBE
http://www.pmarneffei.hku.hk/mbetoolbox/
Betabolic network toolbox for Matlab
http://www.molgen.mpg.de/~lieberme/pages/network_matlab.html
Pharmacokinetics toolbox for Matlab
http://page.inf.fu-berlin.de/~lieber/seiten/pbpk_toolbox.html
The Spider
The spider is intended to be a complete object orientated environment for machine learning in Matlab. Aside from easy use of base learning algorithms, algorithms can be plugged together and can be compared with, e.g model selection, statistical tests and visual plots. This gives all the power of objects (reusability, plug together, share code) but also all the power of Matlab for machine learning research.
http://www.kyb.tuebingen.mpg.de/bs/people/spider/index.html
Schwarz-Christoffel Toolbox
http://www.mathworks.com/matlabcentral/fileexchange/loadFile.do?objectId=1316&objectType=file#
XML Toolbox
http://www.mathworks.com/matlabcentral/fileexchange/loadFile.do?objectId=4278&objectType=file
FIR/TDNN Toolbox for MATLAB
Beta version of a toolbox for FIR (Finite Impulse Response) and TD (Time Delay) Neural Networks.
http://www.cs.utep.edu/interval-comp/dagstuhl.03/oish.pdf
Misc.
http://www.dcsc.tudelft.nl/Research/Software/index.html
Astronomy
Saturn and Titan trajectories ... MALTAB astronomy
http://sprg.ssl.berkeley.edu/~abrecht/Matlab-codes/
Audio
MA Toolbox for Matlab Implementing Similarity Measures for Audio
http://www.oefai.at/~elias/ma/index.html
MAD - Matlab Auditory Demonstrations
http://www.dcs.shef.ac.uk/~martin/MAD/docs/mad.htm
Music Analysis - Toolbox for Matlab : Feature Extraction from Raw Audio Signals for Content-Based Music Retrieval
http://www.ai.univie.ac.at/~elias/ma/
WarpTB - Matlab Toolbox for Warped DSP
By Aki Härmä and Matti Karjalainen
http://www.acoustics.hut.fi/software/warp/
MATLAB-related Software
http://www.dpmi.tu-graz.ac.at/~schloegl/matlab/
Biomedical Signal data formats (EEG machine specific file formats with Matlab import routines)
http://www.dpmi.tu-graz.ac.at/~schloegl/matlab/eeg/
MPEG Encoding library for MATLAB Movies (Created by David Foti)
It enables MATLAB users to read (MPGREAD) or write (MPGWRITE) MPEG movies. That should help Video Quality project.
Filter Design package
http://www.ee.ryerson.ca:8080/~mzeytin/dfp/index.html
Octave by Christophe COUVREUR (Generates normalized A-weigthing, C-weighting, octave and one-third-octave digital filters)
http://www.mathworks.com/matlabcentral/fileexchange/loadFile.do?objectType=file&objectId=69
Source Coding MATLAB Toolbox
http://www.ece.umn.edu/users/kieffer/programs.html
Bio Medical Informatics (Top)
CGH-Plotter: MATLAB Toolbox for CGH-data Analysis
Code: http://sigwww.cs.tut.fi/TICSP/CGH-Plotter/
Poster: http://sigwww.cs.tut.fi/TICSP/CSB2003/Posteri_CGH_Plotter.pdf
The Brain Imaging Software Toolbox
http://www.bic.mni.mcgill.ca/software/
MRI Brain Segmentation
http://www.mathworks.com/matlabcentral/fileexchange/loadFile.do?objectId=4879
Chemometrics (providing PCA) (Top)
Matlab Molecular Biology & Evolution Toolbox
(Toolbox Enables Evolutionary Biologists to Analyze and View DNA and Protein Sequences)
James J. Cai
http://www.pmarneffei.hku.hk/mbetoolbox/
Toolbox provided by Prof. Massart research group
http://minf.vub.ac.be/~fabi/publiek/
Useful collection of routines from Prof age smilde research group
http://www-its.chem.uva.nl/research/pac
Multivariate Toolbox written by Rune Mathisen
http://www.bitjungle.com/~mvartools/index.html
Matlab code and datasets
http://www.acc.umu.se/~tnkjtg/chemometrics/dataset.html
Chaos (Top)
Chaotic Systems Toolbox
http://www.mathworks.com/matlabcentral/fileexchange/loadFile.do?objectId=1597&objectType=file#
HOSA Toolbox
http://www.mathworks.nl/matlabcentral/fileexchange/loadFile.do?objectId=3013&objectType=file
Chemistry (Top)
MetMAP - (Metabolical Modeling, Analysis and oPtimization alias Met. M. A. P.)
http://webpages.ull.es/users/sympbst/pag_ing/pag_metmap/index.htm
DoseLab - A set of software programs for quantitative comparison of measured and computed radiation dose distributions
http://doselab.sourceforge.net
GenBank Overview
http://www.ncbi.nlm.nih.gov/Genbank/GenbankOverview.html
Matlab: http://www.mathworks.com/matlabcentral/fileexchange/loadFile.do?objectId=1139
Coding
Code for the estimation of Scaling Exponents
http://www.cubinlab.ee.mu.oz.au/~darryl/secondorder_code.html
Control (Top)
Control Tutorial for Matlab
http://www.engin.umich.edu/group/ctm/
Another
Communications (Top)
Channel Learning Architecture toolbox
(This Matlab toolbox is a supplement to the article "HiperLearn: A High Performance Learning Architecture")
http://www.isy.liu.se/cvl/Projects/hiperlearn/
Source Coding MATLAB Toolbox
http://www.ece.umn.edu/users/kieffer/programs.html
TCP/UDP/IP Toolbox 2.0.4
http://www.mathworks.com/matlabcentral/fileexchange/loadFile.do?objectId=345&objectType=file
Home Networking Basis: Transmission Environments and Wired/Wireless Protocols
Walter Y. Chen
http://www.mathworks.com/support/books/book5295.jsp?category=new&language=-1
MATLAB M-files and Simulink models
http://www.mathworks.com/matlabcentral/fileexchange/loadFile.do?objectId=3834&objectType=file
Engineering (Top)
OPNML/MATLAB Facilities
http://www.opnml.unc.edu/OPNML_Matlab/
Mesh Generation
http://www.cs.cornell.edu/home/vavasis/qmg-home.html
OpenFEM : An Open-Source Finite Element Toolbox
http://www.openfem.net/
CALFEM is an interactive computer program for teaching the finite element method (FEM)
http://www.byggmek.lth.se/Calfem/frinfo.htm
The Engineering Vibration Toolbox
http://www.cs.wright.edu/people/faculty/jslater/vtoolbox/vtoolbox.html
SaGA - Spatial and Geometric Analysis Toolbox
by Kirill K. Pankratov
http://puddle.mit.edu/~glenn/kirill/saga.html
MexCDF and NetCDF Toolbox For Matlab-5&6
http://woodshole.er.usgs.gov/staffpages/cdenham/public_html/MexCDF/nc4ml5.html
CUEDSID: Cambridge University System Identification Toolbox
http://www-control.eng.cam.ac.uk/jmm/cuedsid/
Kriging Toolbox
http://www.ai-geostats.org/software/Geostats_software/MATLAB_KRIGING_TOOLBOX.htm
Monte Carlo (Dr Nando)
http://www.cs.ubc.ca/~nando/software.html
RIOTS - The Most Powerful Optimal Control Problem Solver
http://blank.hypersurf.com/~adam/RIOTS/
Excel
MATLAB xlsheets
http://www.mathworks.com/matlabcentral/fileexchange/loadFile.do?objectId=4474&objectType=file
write2excel
http://www.mathworks.com/matlabcentral/fileexchange/loadFile.do?objectId=4414&objectType=file
Finite Element Modeling (FEM) (Top)
OpenFEM - An Open-Source Finite Element Toolbox
http://www.openfem.net/
NLFET - nonlinear finite element toolbox for MATLAB ( framework for setting up, solving, and interpreting results for nonlinear static and dynamic finite element analysis.)
http://nlfet.sourceforge.net/
GetFEM - C++ library for finite element methods elementary computations with a Matlab interface
http://www.gmm.insa-tlse.fr/getfem/
FELIPE - FEA package to view results ( contains neat interface to MATLA
http://www.brunel.ac.uk/~blstmbr/felipe/
Finance (Top)
A NEW MATLAB-BASED TOOLBOX FOR COMPUTER AIDED DYNAMIC TECHNICAL TRADING
Stephanos Papadamou and George Stephanides
Department of Applied Informatics, University Of Macedonia Economic & Social Sciences, Thessaloniki, Greece
http://www.fenews.com/fen31/one_time_articles/dynamic_tech_trade_matlab6.htm
Paper: http://econwpa.wustl.edu:8089/eps/prog/papers/0201/0201001.pdf
CompEcon Toolbox for Matlab
http://www4.ncsu.edu/~pfackler/compecon/toolbox.html
Genetic Algorithms (Top)
The Genetic Algorithm Optimization Toolbox (GAOT) for Matlab 5
http://www.ie.ncsu.edu/mirage/GAToolBox/gaot/
Genetic Algorithm Toolbox
Written & distributed by Andy Chipperfield (Sheffield University, UK)
http://www.shef.ac.uk/uni/projects/gaipp/gatbx.html
Manual: http://www.shef.ac.uk/~gaipp/ga-toolbox/manual.pdf
Genetic and Evolutionary Algorithm Toolbox (GEATbx)
http://www.geatbx.com
Evolutionary Algorithms for MATLAB
http://www.geatbx.com/links/ea_matlab.html
Genetic/Evolutionary Algorithms for MATLAB
http://www.systemtechnik.tu-ilmenau.de/~pohlheim/EA_Matlab/ea_matlab.html
Graphics
VideoToolbox (C routines for visual psychophysics on Macs by Denis Pelli)
http://vision.nyu.edu/VideoToolbox/
Paper: http://psych.nyu.edu/pelli/pubs/pelli1997videotoolbox.pdf
4D toolbox
http://www.nmr.mgh.harvard.edu/~daniel/links/matlab/4DToolbox.html
Images (Top)
Eyelink Toolbox
http://psychtoolbox.org/eyelinktoolbox/
Paper: http://psychtoolbox.org/eyelinktoolbox/EyelinkToolbox.pdf
CellStats: Automated statistical analysis of color-stained cell images in Matlab
http://sigwww.cs.tut.fi/TICSP/CellStats/
SDC Morphology Toolbox for MATLAB (powerful collection of latest state-of-the-art gray-scale morphological tools that can be applied to image segmentation, non-linear filtering, pattern recognition and image analysis)
http://www.mmorph.com/
Image Acquisition Toolbox
http://www.mathworks.com/products/imaq/
Halftoning Toolbox for MATLAB
http://www.ece.utexas.edu/~bevans/projects/halftoning/toolbox/index.html DIPimage - A Scientific Image Processing Toolbox for MATLAB
http://www.ph.tn.tudelft.nl/DIPlib/dipimage_1.html
PNM Toolbox
http://home.online.no/~pjacklam/matlab/software/pnm/index.html
Another
ICA / KICA and KPCA (Top)
ICATU Toolbox
http://mole.imm.dtu.dk/toolbox/menu.html
MISEP Linear and Nonlinear ICA Toolbox
http://neural.inesc-id.pt/~lba/ica/mitoolbox.html
Kernel Independant Component Analysis
http://www.cs.berkeley.edu/~fbach/kernel-ica/index.htm
Matlab: kernel-ica version 1.2
KPCA- Please check the software section of kernel machines.
Kernel
Statistical Pattern Recognition Toolbox
http://cmp.felk.cvut.cz/~xfrancv/stprtool/
MATLABArsenal A MATLAB Wrapper for Classification
http://finalfantasyxi.inf.cs.cmu.edu/tmp/MATLABArsenal.htm
Markov (Top)
MapHMMBOX 1.1 - Matlab toolbox for Hidden Markov Modelling using Max. Aposteriori EM
Prerequisites: Matlab 5.0, Netlab. Last Updated: 18 March 2002.
http://www.robots.ox.ac.uk/~parg/software/maphmmbox_1_1.tar
HMMBOX 4.1 - Matlab toolbox for Hidden Markov Modelling using Variational Bayes
Prerequisites: Matlab 5.0,Netlab. Last Updated: 15 February 2002..
http://www.robots.ox.ac.uk/~parg/software/hmmbox_3_2.tar
http://www.robots.ox.ac.uk/~parg/software/hmmbox_4_1.tar
Markov Decision Process (MDP) Toolbox for Matlab
Kevin Murphy, 1999
http://www.ai.mit.edu/~murphyk/Software/MDP/MDP.zip
Markov Decision Process (MDP) Toolbox v1.0 for MATLAB
http://www.inra.fr/bia/T/MDPtoolbox/
Hidden Markov Model (HMM) Toolbox for Matlab
http://www.ai.mit.edu/~murphyk/Software/HMM/hmm.html
Bayes Net Toolbox for Matlab
http://www.ai.mit.edu/~murphyk/Software/BNT/bnt.html
Medical (Top)
EEGLAB Open Source Matlab Toolbox for Physiological Research (formerly ICA/EEG Matlab toolbox)
http://www.sccn.ucsd.edu/~scott/ica.html
MATLAB Biomedical Signal Processing Toolbox
http://bsp.pdx.edu/Toolbox/
Powerful package for neurophysiological data analysis ( Igor Kagan webpage)
http://igoresha.virtualave.net/Matlab/Unitret.html
EEG / MRI Matlab Toolbox
http://eeg.sourceforge.net/
Microarray data analysis toolbox (MDAT): for normalization, adjustment and analysis of gene expression data.
Knowlton N, Dozmorov IM, Centola M. Department of Arthritis and Immunology, Oklahoma Medical Research Foundation, Oklahoma City, OK, USA 73104. We introduce a novel Matlab toolbox for microarray data analysis. This toolbox uses normalization based upon a normally distributed background and differential gene expression based on 5 statistical measures. The objects in this toolbox are open source and can be implemented to suit your application. AVAILABILITY: MDAT v1.0 is a Matlab toolbox and requires Matlab to run. MDAT is freely available at:
http://microarray.omrf.org/publications/2004/knowlton/MDAT.zip
MIDI (Top)
MIDI Toolbox version 1.0 (GNU General Public License)
http://www.jyu.fi/musica/miditoolbox/
Misc. (Top)
MATLAB-The Graphing Tool
http://sprg.ssl.berkeley.edu/~abrecht/matlab.html
3-D Circuits The Circuit Animation Toolbox for MATLAB
http://engineering.dartmouth.edu/other/3Dcircuits/
SendMail
http://carol.wins.uva.nl/~portegie/matlab/sendmail/
Coolplot
http://www.reimeika.ca/marco/matlab/coolplots.html
MPI (Matlab Parallel Interface)
Cornell Multitask Toolbox for MATLAB
http://www.tc.cornell.edu/Services/Software/CMTM/
Beolab Toolbox for v6.5
Thomas Abrahamsson (Professor, Chalmers University of Technology, Applied Mechanics, Göteborg, Sweden)
http://www.mathworks.nl/matlabcentral/fileexchange/loadFile.do?objectId=1216&objectType=file
PARMATLAB
Neural Networks (Top)
SOM Toolbox
http://www.cis.hut.fi/projects/somtoolbox/
Bayes Net Toolbox for Matlab
http://www.ai.mit.edu/~murphyk/Software/BNT/bnt.html
NetLab
http://www.ncrg.aston.ac.uk/netlab/
Random Neural Networks
http://www.cs.ucf.edu/~ahossam/rnnsimv2/
ftp: ftp://ftp.mathworks.com/pub/contrib/v5/nnet/rnnsimv2/
NNSYSID Toolbox (tools for neural network based identification of nonlinear dynamic systems)
http://www.iau.dtu.dk/research/control/nnsysid.html
Oceanography (Top)
WAFO. Wave Analysis for Fatigue and Oceanography
http://www.maths.lth.se/matstat/wafo/
ADCP toolbox for MATLAB (USGS, USA)
Presented at the Hydroacoustics Workshop in Tampa and at ADCP\'s in Action in San Diego
http://woodshole.er.usgs.gov/operations/stg/pubs/ADCPtools
SEA-MAT - Matlab Tools for Oceanographic Analysis
A collaborative effort to organize and distribute Matlab tools for the Oceanographic Community
http://sea-mat.whoi.edu/
Ocean Toolbox
http://www.mar.dfo-mpo.gc.ca/science/ocean/epsonde/programming.html
EUGENE D. GALLAGHER
(Associate Professor, Environmental, Coastal & Ocean Sciences)
http://www.es.umb.edu/edgwebp.htm
Optimization (Top)
MODCONS - a MATLAB Toolbox for Multi-Objective Control System Design
http://www.eee.kcl.ac.uk/mecheng/jfw/modcons.html
Lazy Learning Package
http://iridia.ulb.ac.be/~lazy/
SDPT3 version 3.02 -- a MATLAB software for semidefinite-quadratic-linear programming
http://www.math.nus.edu.sg/~mattohkc/sdpt3.html
Minimum Enclosing Balls: Matlab Code
http://www.compgeom.com/meb/
SOSTOOLS Sum of Squares Optimization Toolbox for MATLAB User’s guide
http://www.cds.caltech.edu/sostools/sostools.pdf
PSOt - a Particle Swarm Optimization Toolbox for use with Matlab
By Brian Birge ... A Particle Swarm Optimization Toolbox (PSOt) for use with the Matlab scientific programming environment has been developed. PSO is
introduced briefly and then the use of the toolbox is explained with some examples. A link to downloadable code is provided.
Plothttp://globec.whoi.edu/software/plotting/gbplot/
Signal Processing (Top)
Filter Design with Motorola DSP56K
http://www.ee.ryerson.ca:8080/~mzeytin/dfp/index.html
Change Detection and Adaptive Filtering Toolbox
http://www.sigmoid.se/
Signal Processing Toolbox
http://www.mathworks.com/products/signal/
ICATU Toolbox
http://mole.imm.dtu.dk/toolbox/menu.html
Time-Frequency Toolbox for Matlab
http://crttsn.univ-nantes.fr/~auger/tftb.html
VoiceBox - Speech Processing Toolbox
http://www.ee.ic.ac.uk/hp/staff/dmb/voicebox/voicebox.html
Least Squared - Support Vector Machines (LS-SVM)
http://www.esat.kuleuven.ac.be/sista/lssvmlab/
WaveLab802 : the Wavelet Toolbox
By David Donoho, Mark Reynold Duncan, Xiaoming Huo, Ofer Levi
http://www-stat.stanford.edu/~wavelab/
Time-series Matlab scripts
http://wise-obs.tau.ac.il/~eran/MATLAB/TimeseriesCon.html
Uvi_Wave Wavelet Toolbox Home Page
http://www.gts.tsc.uvigo.es/~wavelets/index.html
Another
Support Vector Machine (Top)
MATLAB Support Vector Machine Toolbox
Dr Gavin Cawley
School of Information Systems, University of East Anglia
http://theoval.sys.uea.ac.uk/~gcc/svm/toolbox/
LS-SVM - SISTA
SVM toolboxes
http://www.cs.wisc.edu/dmi/svm/
LSVM Lagrangian Support Vector Machine
http://www.cs.wisc.edu/dmi/lsvm/
Statistics (Top)
Logistic regression
http://www.spatial-econometrics.com/
SAGA
http://globec.whoi.edu/software/saga/
Multi-Parametric Toolbox (MPT) A tool (not only) for multi-parametric optimization.
http://control.ee.ethz.ch/~mpt/
ARfit: A Matlab package for the estimation of parameters and eigenmodes of multivariate autoregressive models
http://www.mat.univie.ac.at/~neum/software/arfit/
The Dimensional Analysis Toolbox for MATLAB
Home: http://www.sbrs.de/
Paper: http://www.isd.uni-stuttgart.de/~brueckner/Papers/similarity2002.pdf
FATHOM for Matlab
http://www.rsmas.miami.edu/personal/djones/
PLS-toolbox
http://www.eigenvector.com
Multivariate analysis toolbox (N-way Toolbox - paper)
http://www.models.kvl.dk/source/nwaytoolbox/index.asp
Classification Toolbox for Matlab
http://tiger.technion.ac.il/~eladyt/classification/index.htm
Matlab toolbox for Robust Calibration
http://www.wis.kuleuven.ac.be/stat/robust/toolbox.html
Statistical Parametric Mapping
http://www.fil.ion.ucl.ac.uk/spm/spm2.html
EVIM: A Software Package for Extreme Value Analysis in Matlab
by Ramazan Gençay, Faruk Selcuk and Abdurrahman Ulugulyagci, 2001.
Manual (pdf file) evim.pdf - Software (zip file) evim.zip
Time Series Analysis
http://www.dpmi.tu-graz.ac.at/~schloegl/matlab/tsa/
Bayes Net Toolbox for Matlab
Written by Kevin Murphy
http://www.ai.mit.edu/~murphyk/Software/BNT/bnt.html
Other: http://www.isp.pitt.edu/information/toolboxes.html
ARfit: A Matlab package for the estimation of parameters and eigenmodes of multivariate autoregressive models
http://www.gps.caltech.edu/~tapio/arfit/
M-Fit
http://www.ill.fr/tas/matlab/doc/mfit4/mfit.html
Dimensional Analysis Toolbox for Matlab
http://www.sbrs.net/
The NaN-toolbox: A statistic-toolbox for Octave and Matlab®
... handles data with and without MISSING VALUES.
http://www-dpmi.tu-graz.ac.at/~schloegl/matlab/NaN/
Iterative Methods for Optimization: Matlab Codes
http://www4.ncsu.edu/~ctk/matlab_darts.html
Multiscale Shape Analysis (MSA) Matlab Toolbox 2000
http://www.vision.ime.usp.br/~cesar/projects/multiscale/
Multivariate Ecological & Oceanographic Data Analysis (FATHOM)
From David Jones
http://www.rsmas.miami.edu/personal/djones/
glmlab (Generalized Linear Models in MATLA
http://www.sci.usq.edu.au/staff/dunn/glmlab/glmlab.html
Spacial and Geometric Analysis (SaGA) toolbox
Interesting audio links with FAQ, VC++, on the topic
MATLAB Toolboxes
(C) 2004 - SPMC / SoCCE / UoP
